Basic Search
1 min
mandatory fields for graph constructions are to specify genes and first network options you can either search for your own selected genes (see tab called search and then select option genes ), query by predefined list of genes e g drug targets (resource chembl ( 1 docid 7qmysbpiohulmimemlbbl )), go terms related genes, disease related genes variants (resource clingen ( 2 docid 7qmysbpiohulmimemlbbl )), rare disease s mutated genes (resource orphadata ( 3 docid 7qmysbpiohulmimemlbbl )), or mavatar curated list of genes docid vnez3h3bxwdbsz9436xy alternatively, you can upload your own file docid\ vzvydlul syajo1u6exkh containing list of genes to query (e g list of differentially expressed genes optionally along with the fold changes) or base the graph on the top interactions docid\ vzvydlul syajo1u6exkh to present the network edges with highest t values in the next step select from the drop down menus tissue, context, and version of your interest (by default, the latest version of each network will be used) you can leave remaining parameters set as default and construct gene co expression network by clicking generate graph – the orange button in the left bottom corner of the generate graph card references chembl chembl (available at https //www ebi ac uk/chembl/ https //www ebi ac uk/chembl/ ) welcome to clingen (available at https //www clinicalgenome org/ https //www clinicalgenome org/ ) orphadata – orphanet datasets (available at https //www orphadata com/ https //www orphadata com/ )